PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510332.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 478aa    MW: 53513.5 Da    PI: 7.0797
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510332.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-07391431954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++++P        K++ a++L +A +Y+k L
  XP_004510332.2 391 ARHRRERISEKIRVLQKIVPGG-----SKMDTASMLDEAANYLKFL 431
                     599*****************95.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.17382431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-11387440IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-13388441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.84E-9388436No hitNo description
SMARTSM003533.9E-12388437IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-4392431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MYLLFFLTIQ RFITSNTHGI CITSQSSMAA QGNIYKDQSF ISSQKLQSSM EGLNWNGSEI  60
LESTPILWST HHQEQNMEGD YSSISKSHIH QIQEMDQKVQ TSHTVMMPNT NFSQHAAAAA  120
LTTMTVKSGE AAVSSWKKEP LILQSFQSSS VNKPYNSSTI TTTSTNYMPD FNMAHQQQKQ  180
LIKSGCSFDC LISASTNSNT DTTSIEDDDG ISNIFSDCRR RNLWNFSYAT TASNSSAETD  240
HSNVSNGTNY KNKDMQCNKL NELDETMSQT SSDQLQSKAS DHHFFSTVQN SVSVENGFGI  300
FSDKPPKCKK PRWEKGPFSS NINFQQPKSS TTCCSSSSNE ETDPEAVAAM KEMMYRAAAF  360
RPVNFGMEND VIEKPKRKNV KISNDPQTVA ARHRRERISE KIRVLQKIVP GGSKMDTASM  420
LDEAANYLKF LRSQVKALES LGNKVNAMDC PSTSIAFSFN PSFHMQIHPS DHNNHDYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510332.20.0PREDICTED: transcription factor bHLH87-like isoform X1
SwissprotQ8S3D22e-72BH087_ARATH; Transcription factor bHLH87
TrEMBLA0A072TLG81e-161A0A072TLG8_MEDTR; Transcription factor
STRINGGLYMA07G01611.11e-138(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45303257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.19e-62bHLH family protein